Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn3Q9Z0G9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn3Q9Z0G9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn3Q9Z0G9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn3Q9Z0G9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn3Q9Z0G9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn3Q9Z0G9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.52■□□□□ 0.55
Cldn3Q9Z0G9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn3Q9Z0G9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn3Q9Z0G9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn3Q9Z0G9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cldn3Q9Z0G9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cldn3Q9Z0G9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms