Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ndel1Q9ERR1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.12■□□□□ 0.33
Ndel1Q9ERR1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndel1Q9ERR1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.12■□□□□ 0.33
Ndel1Q9ERR1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndel1Q9ERR1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndel1Q9ERR1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Mir7075-201ENSMUST00000184187 82 ntBASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ndel1Q9ERR1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndel1Q9ERR1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndel1Q9ERR1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ndel1Q9ERR1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Gm27801-201ENSMUST00000184174 223 ntBASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.07■□□□□ 0.32
Ndel1Q9ERR1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms