Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tlr9Q9EQU3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr9Q9EQU3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.19■□□□□ 0.66
Tlr9Q9EQU3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Fst-202ENSMUST00000223640 2612 ntBASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr9Q9EQU3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tlr9Q9EQU3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr9Q9EQU3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr9Q9EQU3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
Tlr9Q9EQU3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tlr9Q9EQU3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr9Q9EQU3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr9Q9EQU3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr9Q9EQU3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr9Q9EQU3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr9Q9EQU3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tlr9Q9EQU3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr9Q9EQU3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr9Q9EQU3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms