Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Gm6211-202ENSMUST00000167849 925 ntBASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps35Q9EQH3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Gm10602-201ENSMUST00000098239 609 ntBASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps35Q9EQH3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps35Q9EQH3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.28■□□□□ 0.52
Vps35Q9EQH3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps35Q9EQH3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps35Q9EQH3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.27■□□□□ 0.51
Vps35Q9EQH3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps35Q9EQH3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms