Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl55Q9CZ83 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Gm11421-201ENSMUST00000122124 294 ntBASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Smad6-203ENSMUST00000179458 273 ntBASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl55Q9CZ83 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Mrpl55Q9CZ83 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mrpl55Q9CZ83 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mrpl55Q9CZ83 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mrpl55Q9CZ83 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms