Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem39aQ9CYC3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tmem39aQ9CYC3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem39aQ9CYC3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem39aQ9CYC3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Gm37055-201ENSMUST00000191866 133 ntBASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem39aQ9CYC3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Gm11249-201ENSMUST00000117071 859 ntBASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Gm10698-201ENSMUST00000182663 604 ntBASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Rarb-207ENSMUST00000225921 2756 ntBASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.54■□□□□ 0.88
Tmem39aQ9CYC3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Gm11643-201ENSMUST00000119578 864 ntBASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tmem39aQ9CYC3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Gm15378-201ENSMUST00000121894 207 ntBASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem39aQ9CYC3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmem39aQ9CYC3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tmem39aQ9CYC3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmem39aQ9CYC3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.52■□□□□ 0.87
Tmem39aQ9CYC3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tmem39aQ9CYC3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms