Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm43371-201ENSMUST00000202838 1031 ntBASIC23.18■■□□□ 1.3
Rtn4Q99P72 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Rtn4Q99P72 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4Q99P72 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Rtn4Q99P72 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4Q99P72 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Rtn4Q99P72 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4Q99P72 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Gm26524-201ENSMUST00000192339 390 ntBASIC23.16■■□□□ 1.3
Rtn4Q99P72 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Rtn4Q99P72 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4Q99P72 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn4Q99P72 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.14■■□□□ 1.29
Rtn4Q99P72 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rtn4Q99P72 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4Q99P72 Gm27275-201ENSMUST00000184318 272 ntBASIC23.14■■□□□ 1.29
Rtn4Q99P72 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.14■■□□□ 1.29
Rtn4Q99P72 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rtn4Q99P72 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
Rtn4Q99P72 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.13■■□□□ 1.29
Rtn4Q99P72 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4Q99P72 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Gm12896-201ENSMUST00000118430 226 ntBASIC23.12■■□□□ 1.29
Rtn4Q99P72 Gm32390-201ENSMUST00000212713 1172 ntBASIC23.12■■□□□ 1.29
Rtn4Q99P72 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4Q99P72 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.11■■□□□ 1.29
Rtn4Q99P72 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4Q99P72 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4Q99P72 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4Q99P72 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4Q99P72 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4Q99P72 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rtn4Q99P72 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms