Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Reep4-203ENSMUST00000226563 1444 ntBASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf111Q99ML9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf111Q99ML9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.73■□□□□ 0.43
Rnf111Q99ML9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.72■□□□□ 0.43
Rnf111Q99ML9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.72■□□□□ 0.43
Rnf111Q99ML9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf111Q99ML9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf111Q99ML9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.71■□□□□ 0.43
Rnf111Q99ML9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf111Q99ML9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.71■□□□□ 0.43
Rnf111Q99ML9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf111Q99ML9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf111Q99ML9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.7■□□□□ 0.42
Rnf111Q99ML9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf111Q99ML9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms