Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaipQ99ME3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SncaipQ99ME3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaipQ99ME3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.91■□□□□ 0.62
SncaipQ99ME3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SncaipQ99ME3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaipQ99ME3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.9■□□□□ 0.62
SncaipQ99ME3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.9■□□□□ 0.62
SncaipQ99ME3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaipQ99ME3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SncaipQ99ME3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SncaipQ99ME3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.89■□□□□ 0.61
SncaipQ99ME3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.89■□□□□ 0.61
SncaipQ99ME3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.89■□□□□ 0.61
SncaipQ99ME3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SncaipQ99ME3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.88■□□□□ 0.61
SncaipQ99ME3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.88■□□□□ 0.61
SncaipQ99ME3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.88■□□□□ 0.61
SncaipQ99ME3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.88■□□□□ 0.61
SncaipQ99ME3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SncaipQ99ME3 Fst-202ENSMUST00000223640 2612 ntBASIC18.87■□□□□ 0.61
SncaipQ99ME3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SncaipQ99ME3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SncaipQ99ME3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.86■□□□□ 0.61
SncaipQ99ME3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SncaipQ99ME3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.85■□□□□ 0.61
SncaipQ99ME3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SncaipQ99ME3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SncaipQ99ME3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SncaipQ99ME3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SncaipQ99ME3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SncaipQ99ME3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.84■□□□□ 0.61
SncaipQ99ME3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms