Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb4Q91XZ6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb4Q91XZ6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb4Q91XZ6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb4Q91XZ6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Pcdhb4Q91XZ6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb4Q91XZ6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb4Q91XZ6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb4Q91XZ6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb4Q91XZ6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Gm13146-201ENSMUST00000118508 780 ntBASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.12■□□□□ 0.49
Pcdhb4Q91XZ6 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms