Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp25Q8VIK1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp25Q8VIK1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp25Q8VIK1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp25Q8VIK1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrnp25Q8VIK1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Gm44549-201ENSMUST00000208351 577 ntBASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrnp25Q8VIK1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snrnp25Q8VIK1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Snrnp25Q8VIK1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.19■□□□□ 0.66
Snrnp25Q8VIK1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrnp25Q8VIK1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.17■□□□□ 0.66
Snrnp25Q8VIK1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms