Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Gm26524-201ENSMUST00000192339 390 ntBASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Gm20049-201ENSMUST00000219950 730 ntBASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retreg1dQ8VE91 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retreg1dQ8VE91 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retreg1dQ8VE91 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Rab3c-203ENSMUST00000224180 967 ntBASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retreg1dQ8VE91 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Rarb-207ENSMUST00000225921 2756 ntBASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Gm20760-201ENSMUST00000179197 648 ntBASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retreg1dQ8VE91 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retreg1dQ8VE91 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retreg1dQ8VE91 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms