Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Q8VDP2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q8VDP2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Q8VDP2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q8VDP2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.84■□□□□ 0.45
Q8VDP2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Q8VDP2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.84■□□□□ 0.45
Q8VDP2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q8VDP2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.83■□□□□ 0.45
Q8VDP2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Q8VDP2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q8VDP2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.83■□□□□ 0.44
Q8VDP2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.83■□□□□ 0.44
Q8VDP2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.83■□□□□ 0.44
Q8VDP2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Q8VDP2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Q8VDP2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q8VDP2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Q8VDP2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.82■□□□□ 0.44
Q8VDP2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Q8VDP2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.82■□□□□ 0.44
Q8VDP2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q8VDP2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Q8VDP2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Q8VDP2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.81■□□□□ 0.44
Q8VDP2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Q8VDP2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.81■□□□□ 0.44
Q8VDP2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q8VDP2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Q8VDP2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.8■□□□□ 0.44
Q8VDP2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.8■□□□□ 0.44
Q8VDP2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Q8VDP2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.8■□□□□ 0.44
Q8VDP2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q8VDP2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms