Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm14117-201ENSMUST00000122417 843 ntBASIC14.96□□□□□ -0.01
Nup35Q8R4R6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.96□□□□□ -0.01
Nup35Q8R4R6 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.96□□□□□ -0.01
Nup35Q8R4R6 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.96□□□□□ -0.01
Nup35Q8R4R6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup35Q8R4R6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nup35Q8R4R6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup35Q8R4R6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nup35Q8R4R6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nup35Q8R4R6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.96□□□□□ -0.02
Nup35Q8R4R6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup35Q8R4R6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup35Q8R4R6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.93□□□□□ -0.02
Nup35Q8R4R6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Rps24-207ENSMUST00000224568 714 ntBASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup35Q8R4R6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Gm12251-201ENSMUST00000117893 792 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Gm27801-201ENSMUST00000184174 223 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Gm43137-201ENSMUST00000198052 594 ntBASIC14.91□□□□□ -0.02
Nup35Q8R4R6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup35Q8R4R6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms