Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm715-201ENSMUST00000117865 831 ntBASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cuedc1Q8R3V6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cuedc1Q8R3V6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Gm11643-201ENSMUST00000119578 864 ntBASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.55■□□□□ 0.24
Cuedc1Q8R3V6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cuedc1Q8R3V6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Gm18666-201ENSMUST00000190039 958 ntBASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cuedc1Q8R3V6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cuedc1Q8R3V6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 Grk6-206ENSMUST00000224995 2971 ntBASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cuedc1Q8R3V6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms