Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Col23a1Q8K4G2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col23a1Q8K4G2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC22.42■■□□□ 1.18
Col23a1Q8K4G2 Gm7153-201ENSMUST00000117092 455 ntBASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Gm17807-201ENSMUST00000186869 298 ntBASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Col23a1Q8K4G2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col23a1Q8K4G2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col23a1Q8K4G2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col23a1Q8K4G2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Col23a1Q8K4G2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Col23a1Q8K4G2 Gm25925-201ENSMUST00000158314 306 ntBASIC22.39■■□□□ 1.17
Col23a1Q8K4G2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col23a1Q8K4G2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col23a1Q8K4G2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col23a1Q8K4G2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col23a1Q8K4G2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col23a1Q8K4G2 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Mir2861-201ENSMUST00000175539 82 ntBASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Gm5587-201ENSMUST00000206270 674 ntBASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col23a1Q8K4G2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Col23a1Q8K4G2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col23a1Q8K4G2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms