Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.48□□□□□ -0.57
Cystm1Q8K353 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Serp2-204ENSMUST00000228055 705 ntBASIC11.48□□□□□ -0.57
Cystm1Q8K353 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.48□□□□□ -0.57
Cystm1Q8K353 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.48□□□□□ -0.57
Cystm1Q8K353 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cystm1Q8K353 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Dapk1-207ENSMUST00000226059 5009 ntBASIC11.47□□□□□ -0.57
Cystm1Q8K353 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cystm1Q8K353 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cystm1Q8K353 Gm45640-201ENSMUST00000210665 1896 ntBASIC11.46□□□□□ -0.58
Cystm1Q8K353 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cystm1Q8K353 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms