Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trpm6Q8CIR4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Gm9987-201ENSMUST00000069768 567 ntBASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trpm6Q8CIR4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Gm38285-201ENSMUST00000192928 922 ntBASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trpm6Q8CIR4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trpm6Q8CIR4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Gm6433-201ENSMUST00000118634 875 ntBASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Gm21814-202ENSMUST00000203277 873 ntBASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm6Q8CIR4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm6Q8CIR4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms