Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.97■□□□□ 0.47
Vps50Q8CI71 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps50Q8CI71 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.96■□□□□ 0.47
Vps50Q8CI71 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Gm37179-201ENSMUST00000194862 823 ntBASIC17.96■□□□□ 0.47
Vps50Q8CI71 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.96■□□□□ 0.47
Vps50Q8CI71 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps50Q8CI71 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Vps50Q8CI71 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Reep4-203ENSMUST00000226563 1444 ntBASIC17.95■□□□□ 0.46
Vps50Q8CI71 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps50Q8CI71 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.94■□□□□ 0.46
Vps50Q8CI71 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.94■□□□□ 0.46
Vps50Q8CI71 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.94■□□□□ 0.46
Vps50Q8CI71 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Vps50Q8CI71 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.93■□□□□ 0.46
Vps50Q8CI71 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.93■□□□□ 0.46
Vps50Q8CI71 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps50Q8CI71 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.93■□□□□ 0.46
Vps50Q8CI71 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps50Q8CI71 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps50Q8CI71 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms