Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lysmd4Q8CC84 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lysmd4Q8CC84 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Tgds-204ENSMUST00000228543 1594 ntBASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lysmd4Q8CC84 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lysmd4Q8CC84 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Lysmd4Q8CC84 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lysmd4Q8CC84 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lysmd4Q8CC84 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms