Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Gm27454-201ENSMUST00000185090 204 ntBASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tsen54Q8C2A2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Gm43137-201ENSMUST00000198052 594 ntBASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tsen54Q8C2A2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tsen54Q8C2A2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tsen54Q8C2A2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tsen54Q8C2A2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms