Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdkl3Q8BLF2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cdkl3Q8BLF2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Gm7143-201ENSMUST00000222811 859 ntBASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdkl3Q8BLF2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdkl3Q8BLF2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdkl3Q8BLF2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdkl3Q8BLF2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdkl3Q8BLF2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms