Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chmp2bQ8BJF9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp2bQ8BJF9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chmp2bQ8BJF9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp2bQ8BJF9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp2bQ8BJF9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms