Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh20Q8BIZ0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Pcdh20Q8BIZ0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh20Q8BIZ0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Pcdh20Q8BIZ0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh20Q8BIZ0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh20Q8BIZ0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh20Q8BIZ0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh20Q8BIZ0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh20Q8BIZ0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms