Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Depdc1bQ8BH88 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Depdc1bQ8BH88 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1bQ8BH88 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Depdc1bQ8BH88 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Depdc1bQ8BH88 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Gm13534-201ENSMUST00000121169 513 ntBASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Depdc1bQ8BH88 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Depdc1bQ8BH88 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1bQ8BH88 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Depdc1bQ8BH88 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Depdc1bQ8BH88 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms