Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc2Q80VA5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc2Q80VA5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc2Q80VA5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc2Q80VA5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Sh3tc2Q80VA5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Mir5122-201ENSMUST00000175004 89 ntBASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc2Q80VA5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Sh3tc2Q80VA5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3tc2Q80VA5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.86■□□□□ 0.77
Sh3tc2Q80VA5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3tc2Q80VA5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms