Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp8Q80U87 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp8Q80U87 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp8Q80U87 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Usp8Q80U87 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.37■□□□□ 0.53
Usp8Q80U87 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp8Q80U87 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.36■□□□□ 0.53
Usp8Q80U87 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.36■□□□□ 0.53
Usp8Q80U87 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp8Q80U87 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp8Q80U87 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp8Q80U87 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp8Q80U87 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Usp8Q80U87 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp8Q80U87 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp8Q80U87 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.34■□□□□ 0.53
Usp8Q80U87 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp8Q80U87 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp8Q80U87 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp8Q80U87 Gm38205-201ENSMUST00000192243 258 ntBASIC18.34■□□□□ 0.53
Usp8Q80U87 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp8Q80U87 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp8Q80U87 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
Usp8Q80U87 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Usp8Q80U87 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp8Q80U87 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp8Q80U87 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.33■□□□□ 0.53
Usp8Q80U87 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp8Q80U87 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp8Q80U87 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp8Q80U87 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp8Q80U87 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp8Q80U87 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.32■□□□□ 0.52
Usp8Q80U87 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Usp8Q80U87 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.32■□□□□ 0.52
Usp8Q80U87 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Usp8Q80U87 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms