Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Gm11249-201ENSMUST00000117071 859 ntBASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Gm6576-201ENSMUST00000169678 883 ntBASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Npc1l1Q6T3U4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Npc1l1Q6T3U4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Npc1l1Q6T3U4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Npc1l1Q6T3U4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Gm2399-201ENSMUST00000104944 225 ntBASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.01■■□□□ 1.11
Npc1l1Q6T3U4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Gm10698-201ENSMUST00000182663 604 ntBASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Npc1l1Q6T3U4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Gm715-201ENSMUST00000117865 831 ntBASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Gm18666-201ENSMUST00000190039 958 ntBASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Npc1l1Q6T3U4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Npc1l1Q6T3U4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Gm13836-201ENSMUST00000121159 501 ntBASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Npc1l1Q6T3U4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms