Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Gm6576-201ENSMUST00000169678 883 ntBASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx58Q6Q899 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ddx58Q6Q899 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ddx58Q6Q899 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx58Q6Q899 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Gm10138-203ENSMUST00000206952 366 ntBASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx58Q6Q899 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx58Q6Q899 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Ddx58Q6Q899 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx58Q6Q899 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx58Q6Q899 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx58Q6Q899 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx58Q6Q899 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.64■■□□□ 1.21
Ddx58Q6Q899 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms