Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
AtmQ62388 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AtmQ62388 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Gm37292-201ENSMUST00000192062 758 ntBASIC17.44■□□□□ 0.38
AtmQ62388 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AtmQ62388 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
AtmQ62388 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.44■□□□□ 0.38
AtmQ62388 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AtmQ62388 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
AtmQ62388 Gm45058-201ENSMUST00000205810 766 ntBASIC17.44■□□□□ 0.38
AtmQ62388 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
AtmQ62388 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AtmQ62388 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AtmQ62388 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AtmQ62388 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.42■□□□□ 0.38
AtmQ62388 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.42■□□□□ 0.38
AtmQ62388 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.42■□□□□ 0.38
AtmQ62388 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AtmQ62388 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
AtmQ62388 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
AtmQ62388 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.41■□□□□ 0.38
AtmQ62388 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
AtmQ62388 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.41■□□□□ 0.38
AtmQ62388 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
AtmQ62388 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AtmQ62388 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.41■□□□□ 0.38
AtmQ62388 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AtmQ62388 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
AtmQ62388 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.4■□□□□ 0.38
AtmQ62388 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AtmQ62388 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Gm10138-203ENSMUST00000206952 366 ntBASIC17.4■□□□□ 0.38
AtmQ62388 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AtmQ62388 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
AtmQ62388 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AtmQ62388 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.4■□□□□ 0.38
AtmQ62388 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AtmQ62388 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.39■□□□□ 0.38
AtmQ62388 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AtmQ62388 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.39■□□□□ 0.37
AtmQ62388 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AtmQ62388 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AtmQ62388 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
AtmQ62388 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AtmQ62388 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms