Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.19■□□□□ 0.34
Sox17Q61473 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox17Q61473 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox17Q61473 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sox17Q61473 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.18■□□□□ 0.34
Sox17Q61473 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox17Q61473 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sox17Q61473 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.17■□□□□ 0.34
Sox17Q61473 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Sox17Q61473 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox17Q61473 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Gm14117-201ENSMUST00000122417 843 ntBASIC17.17■□□□□ 0.34
Sox17Q61473 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.17■□□□□ 0.34
Sox17Q61473 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox17Q61473 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox17Q61473 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sox17Q61473 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sox17Q61473 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.16■□□□□ 0.34
Sox17Q61473 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox17Q61473 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox17Q61473 Spcs1-204ENSMUST00000226782 949 ntBASIC17.16■□□□□ 0.34
Sox17Q61473 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.16■□□□□ 0.34
Sox17Q61473 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox17Q61473 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.16■□□□□ 0.34
Sox17Q61473 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.15■□□□□ 0.34
Sox17Q61473 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Sox17Q61473 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox17Q61473 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Sox17Q61473 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox17Q61473 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Sox17Q61473 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Gm12251-201ENSMUST00000117893 792 ntBASIC17.14■□□□□ 0.33
Sox17Q61473 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox17Q61473 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sox17Q61473 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox17Q61473 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox17Q61473 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox17Q61473 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.13■□□□□ 0.33
Sox17Q61473 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms