Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clcn4Q61418 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
Clcn4Q61418 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.86■□□□□ 0.29
Clcn4Q61418 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Clcn4Q61418 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.86■□□□□ 0.29
Clcn4Q61418 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clcn4Q61418 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.85■□□□□ 0.29
Clcn4Q61418 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clcn4Q61418 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Gm10033-202ENSMUST00000211874 928 ntBASIC16.85■□□□□ 0.29
Clcn4Q61418 Gm9988-201ENSMUST00000069786 435 ntBASIC16.85■□□□□ 0.29
Clcn4Q61418 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.85■□□□□ 0.29
Clcn4Q61418 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clcn4Q61418 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn4Q61418 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clcn4Q61418 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clcn4Q61418 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.84■□□□□ 0.29
Clcn4Q61418 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.84■□□□□ 0.29
Clcn4Q61418 Gm37179-201ENSMUST00000194862 823 ntBASIC16.84■□□□□ 0.29
Clcn4Q61418 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.84■□□□□ 0.29
Clcn4Q61418 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.84■□□□□ 0.29
Clcn4Q61418 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn4Q61418 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn4Q61418 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn4Q61418 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.83■□□□□ 0.28
Clcn4Q61418 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn4Q61418 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.82■□□□□ 0.28
Clcn4Q61418 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcn4Q61418 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Clcn4Q61418 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn4Q61418 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcn4Q61418 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn4Q61418 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn4Q61418 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clcn4Q61418 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clcn4Q61418 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
Clcn4Q61418 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms