Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdf4Q61112 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.62■□□□□ 0.57
Sdf4Q61112 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdf4Q61112 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdf4Q61112 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdf4Q61112 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdf4Q61112 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.61■□□□□ 0.57
Sdf4Q61112 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdf4Q61112 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdf4Q61112 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdf4Q61112 Gm6365-201ENSMUST00000054711 744 ntBASIC18.61■□□□□ 0.57
Sdf4Q61112 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdf4Q61112 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sdf4Q61112 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.6■□□□□ 0.57
Sdf4Q61112 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sdf4Q61112 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdf4Q61112 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.59■□□□□ 0.57
Sdf4Q61112 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdf4Q61112 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.59■□□□□ 0.57
Sdf4Q61112 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.59■□□□□ 0.57
Sdf4Q61112 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.59■□□□□ 0.57
Sdf4Q61112 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Sdf4Q61112 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Sdf4Q61112 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdf4Q61112 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdf4Q61112 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sdf4Q61112 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Sdf4Q61112 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdf4Q61112 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sdf4Q61112 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sdf4Q61112 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.58■□□□□ 0.56
Sdf4Q61112 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.58■□□□□ 0.56
Sdf4Q61112 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sdf4Q61112 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Sdf4Q61112 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdf4Q61112 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sdf4Q61112 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sdf4Q61112 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.57■□□□□ 0.56
Sdf4Q61112 Gm37179-201ENSMUST00000194862 823 ntBASIC18.57■□□□□ 0.56
Sdf4Q61112 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.57■□□□□ 0.56
Sdf4Q61112 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.57■□□□□ 0.56
Sdf4Q61112 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sdf4Q61112 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdf4Q61112 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sdf4Q61112 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sdf4Q61112 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.56■□□□□ 0.56
Sdf4Q61112 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.56■□□□□ 0.56
Sdf4Q61112 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdf4Q61112 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms