Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-3Q5R1E6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Gm13534-201ENSMUST00000121169 513 ntBASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Gm9988-201ENSMUST00000069786 435 ntBASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-3Q5R1E6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-3Q5R1E6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-3Q5R1E6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-3Q5R1E6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-3Q5R1E6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-3Q5R1E6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Reep4-203ENSMUST00000226563 1444 ntBASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-3Q5R1E6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-3Q5R1E6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6-3Q5R1E6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms