Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm10175-202ENSMUST00000208752 441 ntBASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Gm43799-201ENSMUST00000201845 579 ntBASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Gm21814-202ENSMUST00000203277 873 ntBASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Gm5417-201ENSMUST00000079706 384 ntBASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf43Q5NCP0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf43Q5NCP0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf43Q5NCP0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf43Q5NCP0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Zfp783-201ENSMUST00000095946 670 ntBASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf43Q5NCP0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf43Q5NCP0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Gm10138-203ENSMUST00000206952 366 ntBASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf43Q5NCP0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rnf43Q5NCP0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms