Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Gm26571-201ENSMUST00000181399 666 ntBASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Gm42569-201ENSMUST00000200539 472 ntBASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf20Q5DTM8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf20Q5DTM8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf20Q5DTM8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf20Q5DTM8 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf20Q5DTM8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf20Q5DTM8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf20Q5DTM8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf20Q5DTM8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms