Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Gm13158-201ENSMUST00000122007 736 ntBASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Gm18666-201ENSMUST00000190039 958 ntBASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Zfp783-201ENSMUST00000095946 670 ntBASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rc3h1Q4VGL6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rc3h1Q4VGL6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.2■□□□□ 0.98
Rc3h1Q4VGL6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.19■□□□□ 0.98
Rc3h1Q4VGL6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rc3h1Q4VGL6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rc3h1Q4VGL6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rc3h1Q4VGL6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rc3h1Q4VGL6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms