Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Gm13534-201ENSMUST00000121169 513 ntBASIC20.05■□□□□ 0.8
Bbof1Q3V079 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Bbof1Q3V079 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Bbof1Q3V079 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Bbof1Q3V079 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 BC021767-201ENSMUST00000126387 1716 ntBASIC20.03■□□□□ 0.8
Bbof1Q3V079 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.03■□□□□ 0.8
Bbof1Q3V079 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Bbof1Q3V079 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Gm37179-201ENSMUST00000194862 823 ntBASIC20.02■□□□□ 0.8
Bbof1Q3V079 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Bbof1Q3V079 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Bbof1Q3V079 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.02■□□□□ 0.79
Bbof1Q3V079 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.02■□□□□ 0.79
Bbof1Q3V079 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.01■□□□□ 0.79
Bbof1Q3V079 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.01■□□□□ 0.79
Bbof1Q3V079 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Bbof1Q3V079 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Gm37352-201ENSMUST00000193908 2181 ntBASIC20■□□□□ 0.79
Bbof1Q3V079 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Bbof1Q3V079 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Bbof1Q3V079 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20■□□□□ 0.79
Bbof1Q3V079 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Bbof1Q3V079 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.99■□□□□ 0.79
Bbof1Q3V079 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.99■□□□□ 0.79
Bbof1Q3V079 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms