Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl5Q3UTQ8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Gm27405-201ENSMUST00000184201 112 ntBASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl5Q3UTQ8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.22■□□□□ 0.99
Cdkl5Q3UTQ8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm7290-201ENSMUST00000104990 617 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm12918-201ENSMUST00000120234 636 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm15710-201ENSMUST00000121821 636 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm5075-201ENSMUST00000196916 622 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Gm6365-201ENSMUST00000054711 744 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl5Q3UTQ8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cdkl5Q3UTQ8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Gm22325-201ENSMUST00000158904 308 ntBASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Cdkl5Q3UTQ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkl5Q3UTQ8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl5Q3UTQ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdkl5Q3UTQ8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl5Q3UTQ8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms