Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cks1brtQ3UNC9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cks1brtQ3UNC9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cks1brtQ3UNC9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cks1brtQ3UNC9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cks1brtQ3UNC9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.27□□□□□ -0.28
Cks1brtQ3UNC9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cks1brtQ3UNC9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cks1brtQ3UNC9 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.25□□□□□ -0.29
Cks1brtQ3UNC9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms