Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.65□□□□□ -0.38
Cops9Q3U898 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cops9Q3U898 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cops9Q3U898 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cops9Q3U898 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops9Q3U898 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cops9Q3U898 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops9Q3U898 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops9Q3U898 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops9Q3U898 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Gm7332-201ENSMUST00000118351 454 ntBASIC12.63□□□□□ -0.39
Cops9Q3U898 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.63□□□□□ -0.39
Cops9Q3U898 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops9Q3U898 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.62□□□□□ -0.39
Cops9Q3U898 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.62□□□□□ -0.39
Cops9Q3U898 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops9Q3U898 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cops9Q3U898 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.61□□□□□ -0.39
Cops9Q3U898 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cops9Q3U898 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cops9Q3U898 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cops9Q3U898 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cops9Q3U898 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cops9Q3U898 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.6□□□□□ -0.39
Cops9Q3U898 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms