Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.39■□□□□ 0.53
Cdkl4Q3TZA2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl4Q3TZA2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl4Q3TZA2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdkl4Q3TZA2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl4Q3TZA2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Gm10653-202ENSMUST00000139570 835 ntBASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl4Q3TZA2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkl4Q3TZA2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkl4Q3TZA2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkl4Q3TZA2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms