Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shcbp1lQ3TTP0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shcbp1lQ3TTP0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Shcbp1lQ3TTP0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shcbp1lQ3TTP0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Gm27275-201ENSMUST00000184318 272 ntBASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Shcbp1lQ3TTP0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Shcbp1lQ3TTP0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shcbp1lQ3TTP0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shcbp1lQ3TTP0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shcbp1lQ3TTP0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shcbp1lQ3TTP0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms