Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Gm10517-202ENSMUST00000192970 758 ntBASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pdlim7Q3TJD7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdlim7Q3TJD7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Gm23634-201ENSMUST00000175071 91 ntBASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.67■□□□□ 0.9
Pdlim7Q3TJD7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pdlim7Q3TJD7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdlim7Q3TJD7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pdlim7Q3TJD7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Gm12382-201ENSMUST00000122005 922 ntBASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.64■□□□□ 0.89
Pdlim7Q3TJD7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdlim7Q3TJD7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Gm6345-202ENSMUST00000180900 204 ntBASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdlim7Q3TJD7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms