Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atf4Q06507 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.27■□□□□ 0.36
Atf4Q06507 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf4Q06507 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf4Q06507 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.27■□□□□ 0.35
Atf4Q06507 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
Atf4Q06507 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.27■□□□□ 0.35
Atf4Q06507 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.26■□□□□ 0.35
Atf4Q06507 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Atf4Q06507 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.26■□□□□ 0.35
Atf4Q06507 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.26■□□□□ 0.35
Atf4Q06507 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf4Q06507 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.25■□□□□ 0.35
Atf4Q06507 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Atf4Q06507 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Dio3-201ENSMUST00000097228 1449 ntBASIC17.25■□□□□ 0.35
Atf4Q06507 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Atf4Q06507 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.25■□□□□ 0.35
Atf4Q06507 Gm2559-201ENSMUST00000201323 363 ntBASIC17.25■□□□□ 0.35
Atf4Q06507 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.25■□□□□ 0.35
Atf4Q06507 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.25■□□□□ 0.35
Atf4Q06507 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.25■□□□□ 0.35
Atf4Q06507 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf4Q06507 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Atf4Q06507 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf4Q06507 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf4Q06507 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Atf4Q06507 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf4Q06507 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.24■□□□□ 0.35
Atf4Q06507 Gm11643-201ENSMUST00000119578 864 ntBASIC17.24■□□□□ 0.35
Atf4Q06507 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.24■□□□□ 0.35
Atf4Q06507 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atf4Q06507 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf4Q06507 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf4Q06507 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.23■□□□□ 0.35
Atf4Q06507 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Atf4Q06507 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Atf4Q06507 Gm25007-201ENSMUST00000083808 133 ntBASIC17.23■□□□□ 0.35
Atf4Q06507 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf4Q06507 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atf4Q06507 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Atf4Q06507 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Atf4Q06507 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Atf4Q06507 Gm7860-201ENSMUST00000121190 879 ntBASIC17.22■□□□□ 0.35
Atf4Q06507 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.22■□□□□ 0.35
Atf4Q06507 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.22■□□□□ 0.35
Atf4Q06507 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf4Q06507 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf4Q06507 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf4Q06507 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf4Q06507 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf4Q06507 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Atf4Q06507 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf4Q06507 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Atf4Q06507 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Atf4Q06507 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms