Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.26■□□□□ 0.35
Nkx3-2P97503 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx3-2P97503 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
Nkx3-2P97503 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nkx3-2P97503 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nkx3-2P97503 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.24■□□□□ 0.35
Nkx3-2P97503 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.24■□□□□ 0.35
Nkx3-2P97503 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx3-2P97503 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Trmt13-210ENSMUST00000198454 880 ntBASIC17.23■□□□□ 0.35
Nkx3-2P97503 Gm44549-201ENSMUST00000208351 577 ntBASIC17.23■□□□□ 0.35
Nkx3-2P97503 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.23■□□□□ 0.35
Nkx3-2P97503 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Grk6-206ENSMUST00000224995 2971 ntBASIC17.23■□□□□ 0.35
Nkx3-2P97503 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx3-2P97503 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx3-2P97503 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.22■□□□□ 0.35
Nkx3-2P97503 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.22■□□□□ 0.35
Nkx3-2P97503 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx3-2P97503 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.21■□□□□ 0.35
Nkx3-2P97503 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.21■□□□□ 0.35
Nkx3-2P97503 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Gm13168-201ENSMUST00000121771 632 ntBASIC17.21■□□□□ 0.35
Nkx3-2P97503 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.21■□□□□ 0.35
Nkx3-2P97503 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx3-2P97503 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms