Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.82□□□□□ -0.04
Sssca1P56873 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.82□□□□□ -0.04
Sssca1P56873 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sssca1P56873 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sssca1P56873 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.81□□□□□ -0.04
Sssca1P56873 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.81□□□□□ -0.04
Sssca1P56873 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Smad6-203ENSMUST00000179458 273 ntBASIC14.81□□□□□ -0.04
Sssca1P56873 Gm27801-201ENSMUST00000184174 223 ntBASIC14.81□□□□□ -0.04
Sssca1P56873 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.81□□□□□ -0.04
Sssca1P56873 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sssca1P56873 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Sssca1P56873 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sssca1P56873 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sssca1P56873 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.8□□□□□ -0.04
Sssca1P56873 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sssca1P56873 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sssca1P56873 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sssca1P56873 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sssca1P56873 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.79□□□□□ -0.04
Sssca1P56873 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.79□□□□□ -0.04
Sssca1P56873 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.79□□□□□ -0.04
Sssca1P56873 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sssca1P56873 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.78□□□□□ -0.04
Sssca1P56873 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sssca1P56873 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sssca1P56873 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.78□□□□□ -0.04
Sssca1P56873 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.78□□□□□ -0.04
Sssca1P56873 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.78□□□□□ -0.04
Sssca1P56873 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sssca1P56873 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sssca1P56873 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.78□□□□□ -0.04
Sssca1P56873 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sssca1P56873 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sssca1P56873 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sssca1P56873 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sssca1P56873 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sssca1P56873 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.77□□□□□ -0.05
Sssca1P56873 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sssca1P56873 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sssca1P56873 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.77□□□□□ -0.05
Sssca1P56873 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sssca1P56873 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sssca1P56873 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sssca1P56873 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sssca1P56873 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Mir7075-201ENSMUST00000184187 82 ntBASIC14.76□□□□□ -0.05
Sssca1P56873 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms