Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cks2P56390 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks2P56390 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cks2P56390 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cks2P56390 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.31■□□□□ 0.04
Cks2P56390 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.31■□□□□ 0.04
Cks2P56390 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.31■□□□□ 0.04
Cks2P56390 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cks2P56390 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks2P56390 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cks2P56390 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cks2P56390 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cks2P56390 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cks2P56390 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.3■□□□□ 0.04
Cks2P56390 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Cks2P56390 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cks2P56390 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks2P56390 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Cks2P56390 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.29■□□□□ 0.04
Cks2P56390 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cks2P56390 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks2P56390 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cks2P56390 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.28■□□□□ 0.04
Cks2P56390 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Cks2P56390 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.28■□□□□ 0.04
Cks2P56390 Gm8493-201ENSMUST00000196881 489 ntBASIC15.28■□□□□ 0.04
Cks2P56390 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cks2P56390 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cks2P56390 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks2P56390 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.27■□□□□ 0.04
Cks2P56390 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Cks2P56390 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.27■□□□□ 0.04
Cks2P56390 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cks2P56390 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cks2P56390 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks2P56390 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cks2P56390 Gm13241-201ENSMUST00000094493 780 ntBASIC15.27■□□□□ 0.04
Cks2P56390 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks2P56390 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks2P56390 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks2P56390 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cks2P56390 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks2P56390 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks2P56390 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cks2P56390 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks2P56390 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cks2P56390 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms