Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Msh6P54276 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Msh6P54276 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
Msh6P54276 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Msh6P54276 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Msh6P54276 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Msh6P54276 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.4■■□□□ 1.34
Msh6P54276 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Msh6P54276 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC23.39■■□□□ 1.34
Msh6P54276 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Msh6P54276 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Msh6P54276 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Msh6P54276 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
Msh6P54276 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Msh6P54276 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Msh6P54276 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Msh6P54276 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Msh6P54276 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Msh6P54276 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Msh6P54276 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC23.38■■□□□ 1.33
Msh6P54276 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.38■■□□□ 1.33
Msh6P54276 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Msh6P54276 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Msh6P54276 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.38■■□□□ 1.33
Msh6P54276 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Msh6P54276 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Msh6P54276 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.37■■□□□ 1.33
Msh6P54276 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
Msh6P54276 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.37■■□□□ 1.33
Msh6P54276 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Msh6P54276 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Msh6P54276 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Msh6P54276 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Msh6P54276 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Msh6P54276 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msh6P54276 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Msh6P54276 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.35■■□□□ 1.33
Msh6P54276 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.35■■□□□ 1.33
Msh6P54276 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Msh6P54276 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Msh6P54276 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Msh6P54276 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.34■■□□□ 1.33
Msh6P54276 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Msh6P54276 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Msh6P54276 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Msh6P54276 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC23.33■■□□□ 1.33
Msh6P54276 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Msh6P54276 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msh6P54276 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Msh6P54276 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.32■■□□□ 1.32
Msh6P54276 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.32■■□□□ 1.32
Msh6P54276 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Msh6P54276 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Msh6P54276 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.31■■□□□ 1.32
Msh6P54276 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms