Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.11■□□□□ 0.01
Cdkn1aP39689 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdkn1aP39689 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Gm22325-201ENSMUST00000158904 308 ntBASIC15.1■□□□□ 0.01
Cdkn1aP39689 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdkn1aP39689 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.09■□□□□ 0.01
Cdkn1aP39689 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cdkn1aP39689 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cdkn1aP39689 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cdkn1aP39689 Flg-201ENSMUST00000050758 1488 ntBASIC15.08■□□□□ 0.01
Cdkn1aP39689 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkn1aP39689 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.08■□□□□ 0
Cdkn1aP39689 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.08■□□□□ 0
Cdkn1aP39689 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.08■□□□□ 0
Cdkn1aP39689 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkn1aP39689 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cdkn1aP39689 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Gm5643-201ENSMUST00000117081 966 ntBASIC15.07■□□□□ 0
Cdkn1aP39689 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.07■□□□□ 0
Cdkn1aP39689 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.07■□□□□ 0
Cdkn1aP39689 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.07■□□□□ 0
Cdkn1aP39689 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.07■□□□□ 0
Cdkn1aP39689 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.07■□□□□ 0
Cdkn1aP39689 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cdkn1aP39689 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Cdkn1aP39689 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkn1aP39689 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cdkn1aP39689 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkn1aP39689 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkn1aP39689 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.06■□□□□ 0
Cdkn1aP39689 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkn1aP39689 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkn1aP39689 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms